2017年发表论文

 

Cusps enable line attractors for neural computation.

Xiao, Z., et al. .

Physical Review E, 2017. 96(5). [Html]

 

Folding DNA into a Lipid-Conjugated Nanobarrel for Controlled Reconstitution of Membrane Proteins.

Dong, Y., et al. .

Angew Chem Int Ed Engl, 2017. [Html]



Streamline-based purification of bacterial samples from liquefied sputum utilizing microfluidics.

Wu, T., et al. .

Lab on a Chip, 2017. 17(21): p. 3601-3608 . [Html]

 

Single Living yEast PM Toxicity Sensor (SLEPTor) System.

Wei, K., et al. .

Journal of Aerosol Science, 2017. 107: p. 65-73 . [Html]

 

Relative biological effectiveness for photons: implication of complex DNA double-strand breaks as critical lesions.

Liang, Y., et al. .

Physics in Medicine and Biology, 2017. 62(6): p. 2153-2175 . [Html]

 

Using Microfluidic Devices to Measure Lifespan and Cellular Phenotypes in Single Budding Yeast Cells.

Ke, Z., et al. .

Jove-Journal of Visualized Experiments, 2017(121). [Html]

 

Sequence imperfections and base triplet recognition by the Rad51/RecA family of recombinases.

Lee, J.Y., et al. .

Journal of Biological Chemistry, 2017. 292(26): p. 11125-11135 . [Html]

 

gCoda: Conditional Dependence Network Inference for Compositional Data.

Fang, H.Y., et al. .

Journal of Computational Biology, 2017. 24(7): p. 699-708 . [Html]

 

Rational Design of Selective Allosteric Inhibitors of PHGDH and Serine Synthesis with Anti-tumor Activity.

Wang, Q., et al. .

Cell Chemical Biology, 2017. 24(1): p. 55-65 . [Html]

 

A global characterization of the translational and transcriptional programs induced by methionine restriction through ribosome profiling and RNA-seq.

Zou, K., et al. .

Bmc Genomics, 2017. 18. [Html]

 

Mean field study of a propagation-turnover lattice model for the dynamics of histone marking.

Yao, F., F.T. Li, and T.J. Li .

Science China-Physics Mechanics & Astronomy, 2017. 60(2). [Html]

 

Voltage Gating of a Biomimetic Nanopore: Electrowetting of a Hydrophobic Barrier.

Trick, J.L., et al. .

Acs Nano, 2017. 11(2): p. 1840-1847 . [Html]

 

Finding non-classical critical nuclei and minimum energy path of Cu precipitates in Fe-Cu alloys.

Li, B.Y., et al. .

Modelling and Simulation in Materials Science and Engineering, 2017. 25(8). [Html]

 

Rational Design of an Ultrasensitive Quorum-Sensing Switch.

Zeng, W.Q., et al. .

Acs Synthetic Biology, 2017. 6(8): p. 1445-1452 . [Html]

 

Computational design of ligand-binding proteins.

Yang, W. and L.H. Lai .

Current Opinion in Structural Biology, 2017. 45: p. 67-73 . [Html]

 

Analysis and correction of errors in nanoscale particle tracking using the Single-pixel interior filling function (SPIFF) algorithm.

Yifat, Y., et al. .

Sci Rep, 2017. 7(1): p. 16553 . [Html]

 

Design of Tunable Oscillatory Dynamics in a Synthetic NF-kappaB Signaling Circuit.

Zhang, Z.B., et al. .

Cell Syst, 2017. 5(5): p. 460-470 e5 . [Html]

 

Odor-evoked inhibition of olfactory sensory neurons drives olfactory perception in Drosophila.

Cao, L.H., et al. .

Nat Commun, 2017. 8(1): p. 1357 . [Html]

 

The orientation and stability of the GPCR-Arrestin complex in a lipid bilayer.

Wang, D., et al. .

Sci Rep, 2017. 7(1): p. 16985 . [Html]

 

Innovating Chinese Herbal Medicine: From Traditional Health Practice to Scientific Drug Discovery.

Gu, S. and J. Pei .

Front Pharmacol, 2017. 8: p. 381 . [Html]

 

Segmentation and classification of two-channel C. elegans nucleus-labeled fluorescence images.

Zhao, M., et al. .

BMC Bioinformatics, 2017. 18(1): p. 412 . [Html]

 

Genome-scale fluxes predicted under the guidance of enzyme abundance using a novel hyper-cube shrink algorithm.

Xie, Z., T. Zhang, and Q. Ouyang .

Bioinformatics, 2017. [Html]

 

Tuning SpyTag-SpyCatcher mutant pairs toward orthogonal reactivity encryption.

Liu, Y., et al. .

Chem Sci, 2017. 8(9): p. 6577-6582 . [Html]

 

Deep Learning Based Regression and Multiclass Models for Acute Oral Toxicity Prediction with Automatic Chemical Feature Extraction.

Xu, Y., J. Pei, and L. Lai .

J Chem Inf Model, 2017. [Html]

 

MetaComp: comprehensive analysis software for comparative meta-omics including comparative metagenomics.

Zhai, P., et al. .

BMC Bioinformatics, 2017. 18(1): p. 434 . [Html]

 

SVmine improves structural variation detection by integrative mining of predictions from multiple algorithms.

Xia, Y., et al. .

Bioinformatics, 2017. 33(21): p. 3348-3354 . [Html]

 

Sequence-based prediction of protein protein interaction using a deep-learning algorithm.

Sun, T., et al. .

BMC Bioinformatics, 2017. 18(1): p. 277 . [Html]

 

PharmMapper 2017 update: a web server for potential drug target identification with a comprehensive target pharmacophore database.

Wang, X., et al. .

Nucleic Acids Res, 2017. [Html]

 

Processes on the emergent landscapes of biochemical reaction networks and heterogeneous cell population dynamics: differentiation in living matters.

Huang, S., et al. .

J R Soc Interface, 2017. 14(130). [Html]

 

Designed inhibitor for nuclear localization signal of polo-like kinase 1 induces mitotic arrest.

Chen, F., et al. .

Chem Biol Drug Des, 2017. 89(5): p. 732-740 . [Html]

 

Computational Multitarget Drug Design.

Zhang, W., J. Pei, and L. Lai .

J Chem Inf Model, 2017. 57(3): p. 403-412 . [Html]

 

[Signaling network-based functional cell design].

Ju, J. and P. Wei .

Sheng Wu Gong Cheng Xue Bao, 2017. 33(3): p. 386-392 . [Html]

 

RCN1 suppresses ER stress-induced apoptosis via calcium homeostasis and PERK-CHOP signaling.

Xu, S., et al. .

Oncogenesis, 2017. 6(3): p. e304 . [Html]

 

Engineering Escherichia coli to bind to cyanobacteria.

Zhang, Z., et al. .

J Biosci Bioeng, 2017. 123(3): p. 347-352 . [Html]

 

Statistical Analysis and Prediction of Covalent Ligand Targeted Cysteine Residues.

Zhang, W., J. Pei, and L. Lai .

J Chem Inf Model, 2017. 57(6): p. 1453-1460 . [Html]

 

Apical constriction is driven by a pulsatile apical myosin network in delaminating Drosophila neuroblasts.

An, Y., et al. .

Development, 2017. 144(12): p. 2153-2164 . [Html]

 

NF-kappaB signaling and cell-fate decision induced by a fast-dissociating tumor necrosis factor mutant.

Zhang, X., et al. .

Biochem Biophys Res Commun, 2017. 489(3): p. 287-292 . [Html]

 

A deep convolutional neural network approach to single-particle recognition in cryo-electron microscopy.

Zhu, Y., Q. Ouyang, and Y. Mao .

BMC Bioinformatics, 2017. 18(1): p. 348 . [Html]

 

Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.

Lu, Y., et al. .

Mol Cell, 2017. 67(2): p. 322-333.e6 . [Html]

 

Cryo-EM structure of the DNA-PK holoenzyme.

Sharif, H., et al. .

Proc Natl Acad Sci U S A, 2017. 114(28): p. 7367-7372 . [Html]

 

Insulated transcriptional elements enable precise design of genetic circuits.

Zong, Y., et al. .

Nat Commun, 2017. 8(1): p. 52 . [Html]

 

Reconstructing the regulatory circuit of cell fate determination in yeast mating response.

Shao, B., et al. .

PLoS Comput Biol, 2017. 13(7): p. e1005671 . [Html]

 

Live visualization of genomic loci with BiFC-TALE.

Hu, H., et al. .

Sci Rep, 2017. 7: p. 40192 . [Html]

 

Novel T7-like expression systems used for Halomonas.

Zhao, H., et al. .

Metab Eng, 2017. 39: p. 128-140 . [Html]

 

Exploring the inhibitory effect of membrane tension on cell polarization.

Wang, W., et al. .

PLoS Comput Biol, 2017. 13(1): p. e1005354 . [Html]

 

Adaptation with transcriptional regulation.

Shi, W., et al. .

Sci Rep, 2017. 7: p. 42648 . [Html]

 

Paired Design of dCas9 as a Systematic Platform for the Detection of Featured Nucleic Acid Sequences in Pathogenic Strains.

Zhang, Y., et al. .

ACS Synth Biol, 2017. 6(2): p. 211-216 . [Html]

 

Spontaneous activation of visual pigments in relation to openness/closedness of chromophore-binding pocket.

Yue, W.W., et al. .

Elife, 2017. 6. [Html]

 

High-throughput single-cell analysis for the proteomic dynamics study of the yeast osmotic stress response.

Zhang, R., et al. .

Sci Rep, 2017. 7: p. 42200 . [Html]

 

Switching of the substrate specificity of protein tyrosine phosphatase N12 by cyclin-dependent kinase 2 phosphorylation orchestrating 2 oncogenic pathways.

Li, H., et al. .

Faseb j, 2017. [Html]

 

Hierarchical assembly of centriole subdistal appendages via centrosome binding proteins CCDC120 and CCDC68.

Huang, N., et al. .

Nat Commun, 2017. 8: p. 15057 . [Html]

 

Robust network topologies for generating oscillations with temperature-independent periods.

Wu, L., Q. Ouyang, and H. Wang .

PLoS One, 2017. 12(2): p. e0171263 . [Html]

 

Massively parallel unsupervised single-particle cryo-EM data clustering via statistical manifold learning.

Wu, J., et al. .

PLoS One, 2017. 12(8): p. e0182130 . [Html]

 

Chinese Herbal Medicine Meets Biological Networks of Complex Diseases: A Computational Perspective.

Gu, S. and J. Pei .

Evid Based Complement Alternat Med, 2017. 2017: p. 7198645 . [Html]

 

Visualizing biological reaction intermediates with DNA curtains.

 

Zhao, Y., et al.

Journal of Physics D-Applied Physics, 2017. 50(15). [Html]

  

Barrier Crossing in Escherichia coli Chemotaxis.

 

Zhaojun, L., et al.

Physical Review Letters, 2017. 118(9): p. 098101 (5 pp.)-098101 (5 pp.). [Html]

 

VCNet: Vector based gene Co-expression Network construction and its application to RNA-seq data.

 

Wang, Z., et al.

Bioinformatics (Oxford, England), 2017. [Html]